J6_3CC7_002

3D structure

PDB id

3CC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UUUA*UUUG*CG*CGCC*GUCUAGCGAACC*GAUGACAGAAAA

Length

38 nucleotides

Bulged bases

3CC7|1|0|U|2117, 3CC7|1|0|A|2425, 3CC7|1|0|C|2427, 3CC7|1|0|A|2465, 3CC7|1|0|A|2467, 3CC7|1|0|A|2468

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CC7|1|0|U|2115
3CC7|1|0|U|2116
3CC7|1|0|U|2117
3CC7|1|0|A|2118
*
3CC7|1|0|U|2276
3CC7|1|0|U|2277
3CC7|1|0|U|2278
3CC7|1|0|G|2279
*
3CC7|1|0|C|2292
3CC7|1|0|G|2293
*
3CC7|1|0|C|2315
3CC7|1|0|G|2316
3CC7|1|0|C|2317
3CC7|1|0|C|2318
*
3CC7|1|0|G|2421
3CC7|1|0|U|2422
3CC7|1|0|C|2423
3CC7|1|0|U|2424
3CC7|1|0|A|2425
3CC7|1|0|G|2426
3CC7|1|0|C|2427
3CC7|1|0|G|2428
3CC7|1|0|A|2429
3CC7|1|0|A|2430
3CC7|1|0|C|2431
3CC7|1|0|C|2432
*
3CC7|1|0|G|2459
3CC7|1|0|A|2460
3CC7|1|0|U|2461
3CC7|1|0|G|2462
3CC7|1|0|A|2463
3CC7|1|0|C|2464
3CC7|1|0|A|2465
3CC7|1|0|G|2466
3CC7|1|0|A|2467
3CC7|1|0|A|2468
3CC7|1|0|A|2469
3CC7|1|0|A|2470

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L44E

Chain A

50S ribosomal protein L2P

Chain L

50S ribosomal protein L15P

Chain M

50S ribosomal protein L15e

Chain Q

50S ribosomal protein L21e