Loop J6_3CCL

3D structure

PDB id: 3CCL (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Loop

Sequence: UUUA*UUUG*CG*CGCC*GUCUAGCGAACC*GAUGACAGAAAA
Length: 38 nucleotides
Bulged bases: 3CCL|1|0|U|2117, 3CCL|1|0|A|2425, 3CCL|1|0|A|2465, 3CCL|1|0|A|2467, 3CCL|1|0|A|2468
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

3CCL|1|0|U|2115
3CCL|1|0|U|2116
3CCL|1|0|U|2117
3CCL|1|0|A|2118
*
3CCL|1|0|U|2276
3CCL|1|0|U|2277
3CCL|1|0|U|2278
3CCL|1|0|G|2279
*
3CCL|1|0|C|2292
3CCL|1|0|G|2293
*
3CCL|1|0|C|2315
3CCL|1|0|G|2316
3CCL|1|0|C|2317
3CCL|1|0|C|2318
*
3CCL|1|0|G|2421
3CCL|1|0|U|2422
3CCL|1|0|C|2423
3CCL|1|0|U|2424
3CCL|1|0|A|2425
3CCL|1|0|G|2426
3CCL|1|0|C|2427
3CCL|1|0|G|2428
3CCL|1|0|A|2429
3CCL|1|0|A|2430
3CCL|1|0|C|2431
3CCL|1|0|C|2432
*
3CCL|1|0|G|2459
3CCL|1|0|A|2460
3CCL|1|0|U|2461
3CCL|1|0|G|2462
3CCL|1|0|A|2463
3CCL|1|0|C|2464
3CCL|1|0|A|2465
3CCL|1|0|G|2466
3CCL|1|0|A|2467
3CCL|1|0|A|2468
3CCL|1|0|A|2469
3CCL|1|0|A|2470

Current chains

Chain 0: 23S RIBOSOMAL RNA

Nearby chains

Chain 3: 50S ribosomal protein L44E
Chain A: 50S ribosomal protein L2P
Chain L: 50S ribosomal protein L15P
Chain M: 50S ribosomal protein L15e
Chain Q: 50S ribosomal protein L21e

J6_3CCL_002