J6_3CCM_002

3D structure

PDB id

3CCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UUUA*UUUG*CG*CGCC*GUCUAGCGAACC*GAUGACAGAAAA

Length

38 nucleotides

Bulged bases

3CCM|1|0|U|2117, 3CCM|1|0|A|2425, 3CCM|1|0|A|2465, 3CCM|1|0|A|2467, 3CCM|1|0|A|2468

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CCM|1|0|U|2115
3CCM|1|0|U|2116
3CCM|1|0|U|2117
3CCM|1|0|A|2118
*
3CCM|1|0|U|2276
3CCM|1|0|U|2277
3CCM|1|0|U|2278
3CCM|1|0|G|2279
*
3CCM|1|0|C|2292
3CCM|1|0|G|2293
*
3CCM|1|0|C|2315
3CCM|1|0|G|2316
3CCM|1|0|C|2317
3CCM|1|0|C|2318
*
3CCM|1|0|G|2421
3CCM|1|0|U|2422
3CCM|1|0|C|2423
3CCM|1|0|U|2424
3CCM|1|0|A|2425
3CCM|1|0|G|2426
3CCM|1|0|C|2427
3CCM|1|0|G|2428
3CCM|1|0|A|2429
3CCM|1|0|A|2430
3CCM|1|0|C|2431
3CCM|1|0|C|2432
*
3CCM|1|0|G|2459
3CCM|1|0|A|2460
3CCM|1|0|U|2461
3CCM|1|0|G|2462
3CCM|1|0|A|2463
3CCM|1|0|C|2464
3CCM|1|0|A|2465
3CCM|1|0|G|2466
3CCM|1|0|A|2467
3CCM|1|0|A|2468
3CCM|1|0|A|2469
3CCM|1|0|A|2470

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E

Chain A

50S ribosomal protein L2P

Chain L

50S ribosomal protein L15P

Chain M

50S ribosomal protein L15e

Chain Q

50S ribosomal protein L21e