J6_3CCR_001

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC

Length

36 nucleotides

Bulged bases

3CCR|1|0|A|193, 3CCR|1|0|C|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CCR|1|0|G|41
3CCR|1|0|C|42
*
3CCR|1|0|G|149
3CCR|1|0|G|150
3CCR|1|0|A|151
3CCR|1|0|A|152
3CCR|1|0|C|153
*
3CCR|1|0|G|184
3CCR|1|0|G|185
3CCR|1|0|A|186
3CCR|1|0|A|187
3CCR|1|0|C|188
3CCR|1|0|A|189
3CCR|1|0|G|190
3CCR|1|0|A|191
3CCR|1|0|A|192
3CCR|1|0|A|193
3CCR|1|0|A|194
*
3CCR|1|0|U|202
3CCR|1|0|G|203
3CCR|1|0|A|204
3CCR|1|0|U|205
3CCR|1|0|G|206
*
3CCR|1|0|U|233
3CCR|1|0|A|234
3CCR|1|0|C|235
3CCR|1|0|A|236
3CCR|1|0|G|237
*
3CCR|1|0|C|433
3CCR|1|0|U|434
3CCR|1|0|A|435
3CCR|1|0|A|436
3CCR|1|0|A|437
3CCR|1|0|C|438
3CCR|1|0|A|439
3CCR|1|0|C|440

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain M

50S ribosomal protein L15e