J6_3CCU_002

3D structure

PDB id

3CCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUUA*UUUG*CG*CGCC*GUCUAGCGAACC*GAUGACAGAAAA

Length

38 nucleotides

Bulged bases

3CCU|1|0|U|2117, 3CCU|1|0|A|2425, 3CCU|1|0|A|2465, 3CCU|1|0|A|2467, 3CCU|1|0|A|2468

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CCU|1|0|U|2115
3CCU|1|0|U|2116
3CCU|1|0|U|2117
3CCU|1|0|A|2118
*
3CCU|1|0|U|2276
3CCU|1|0|U|2277
3CCU|1|0|U|2278
3CCU|1|0|G|2279
*
3CCU|1|0|C|2292
3CCU|1|0|G|2293
*
3CCU|1|0|C|2315
3CCU|1|0|G|2316
3CCU|1|0|C|2317
3CCU|1|0|C|2318
*
3CCU|1|0|G|2421
3CCU|1|0|U|2422
3CCU|1|0|C|2423
3CCU|1|0|U|2424
3CCU|1|0|A|2425
3CCU|1|0|G|2426
3CCU|1|0|C|2427
3CCU|1|0|G|2428
3CCU|1|0|A|2429
3CCU|1|0|A|2430
3CCU|1|0|C|2431
3CCU|1|0|C|2432
*
3CCU|1|0|G|2459
3CCU|1|0|A|2460
3CCU|1|0|U|2461
3CCU|1|0|G|2462
3CCU|1|0|A|2463
3CCU|1|0|C|2464
3CCU|1|0|A|2465
3CCU|1|0|G|2466
3CCU|1|0|A|2467
3CCU|1|0|A|2468
3CCU|1|0|A|2469
3CCU|1|0|A|2470

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E

Chain A

50S ribosomal protein L2P

Chain L

50S ribosomal protein L15P

Chain M

50S ribosomal protein L15e

Chain Q

50S ribosomal protein L21e