J6_3CD6_001
3D structure
- PDB id
- 3CD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC
- Length
- 36 nucleotides
- Bulged bases
- 3CD6|1|0|A|193, 3CD6|1|0|C|438
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3CD6|1|0|G|41
3CD6|1|0|C|42
*
3CD6|1|0|G|149
3CD6|1|0|G|150
3CD6|1|0|A|151
3CD6|1|0|A|152
3CD6|1|0|C|153
*
3CD6|1|0|G|184
3CD6|1|0|G|185
3CD6|1|0|A|186
3CD6|1|0|A|187
3CD6|1|0|C|188
3CD6|1|0|A|189
3CD6|1|0|G|190
3CD6|1|0|A|191
3CD6|1|0|A|192
3CD6|1|0|A|193
3CD6|1|0|A|194
*
3CD6|1|0|U|202
3CD6|1|0|G|203
3CD6|1|0|A|204
3CD6|1|0|U|205
3CD6|1|0|G|206
*
3CD6|1|0|U|233
3CD6|1|0|A|234
3CD6|1|0|C|235
3CD6|1|0|A|236
3CD6|1|0|G|237
*
3CD6|1|0|C|433
3CD6|1|0|U|434
3CD6|1|0|A|435
3CD6|1|0|A|436
3CD6|1|0|A|437
3CD6|1|0|C|438
3CD6|1|0|A|439
3CD6|1|0|C|440
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L37e
- Chain M
- 50S ribosomal protein L15e
Coloring options: