J6_3CME_001

3D structure

PDB id

3CME (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC

Length

36 nucleotides

Bulged bases

3CME|1|0|A|193, 3CME|1|0|C|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CME|1|0|G|41
3CME|1|0|C|42
*
3CME|1|0|G|149
3CME|1|0|G|150
3CME|1|0|A|151
3CME|1|0|A|152
3CME|1|0|C|153
*
3CME|1|0|G|184
3CME|1|0|G|185
3CME|1|0|A|186
3CME|1|0|A|187
3CME|1|0|C|188
3CME|1|0|A|189
3CME|1|0|G|190
3CME|1|0|A|191
3CME|1|0|A|192
3CME|1|0|A|193
3CME|1|0|A|194
*
3CME|1|0|U|202
3CME|1|0|G|203
3CME|1|0|A|204
3CME|1|0|U|205
3CME|1|0|G|206
*
3CME|1|0|U|233
3CME|1|0|A|234
3CME|1|0|C|235
3CME|1|0|A|236
3CME|1|0|G|237
*
3CME|1|0|C|433
3CME|1|0|U|434
3CME|1|0|A|435
3CME|1|0|A|436
3CME|1|0|A|437
3CME|1|0|C|438
3CME|1|0|A|439
3CME|1|0|C|440

Current chains

Chain 0

50S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain M

50S ribosomal protein L15e