J6_3CXC_001

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC

Length

36 nucleotides

Bulged bases

3CXC|1|0|A|193, 3CXC|1|0|C|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CXC|1|0|G|41
3CXC|1|0|C|42
*
3CXC|1|0|G|149
3CXC|1|0|G|150
3CXC|1|0|A|151
3CXC|1|0|A|152
3CXC|1|0|C|153
*
3CXC|1|0|G|184
3CXC|1|0|G|185
3CXC|1|0|A|186
3CXC|1|0|A|187
3CXC|1|0|C|188
3CXC|1|0|A|189
3CXC|1|0|G|190
3CXC|1|0|A|191
3CXC|1|0|A|192
3CXC|1|0|A|193
3CXC|1|0|A|194
*
3CXC|1|0|U|202
3CXC|1|0|G|203
3CXC|1|0|A|204
3CXC|1|0|U|205
3CXC|1|0|G|206
*
3CXC|1|0|U|233
3CXC|1|0|A|234
3CXC|1|0|C|235
3CXC|1|0|A|236
3CXC|1|0|G|237
*
3CXC|1|0|C|433
3CXC|1|0|U|434
3CXC|1|0|A|435
3CXC|1|0|A|436
3CXC|1|0|A|437
3CXC|1|0|C|438
3CXC|1|0|A|439
3CXC|1|0|C|440

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain L

RIBOSOMAL PROTEIN L15E

Chain Z

RIBOSOMAL PROTEIN L37E