J6_3I55_001

3D structure

PDB id

3I55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC

Length

36 nucleotides

Bulged bases

3I55|1|0|A|193, 3I55|1|0|C|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3I55|1|0|G|41
3I55|1|0|C|42
*
3I55|1|0|G|149
3I55|1|0|G|150
3I55|1|0|A|151
3I55|1|0|A|152
3I55|1|0|C|153
*
3I55|1|0|G|184
3I55|1|0|G|185
3I55|1|0|A|186
3I55|1|0|A|187
3I55|1|0|C|188
3I55|1|0|A|189
3I55|1|0|G|190
3I55|1|0|A|191
3I55|1|0|A|192
3I55|1|0|A|193
3I55|1|0|A|194
*
3I55|1|0|U|202
3I55|1|0|G|203
3I55|1|0|A|204
3I55|1|0|U|205
3I55|1|0|G|206
*
3I55|1|0|U|233
3I55|1|0|A|234
3I55|1|0|C|235
3I55|1|0|A|236
3I55|1|0|G|237
*
3I55|1|0|C|433
3I55|1|0|U|434
3I55|1|0|A|435
3I55|1|0|A|436
3I55|1|0|A|437
3I55|1|0|C|438
3I55|1|0|A|439
3I55|1|0|C|440

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain M

50S ribosomal protein L15e