J6_3J7R_001
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GACUG*CAAAGCAU*AUGUGAUUUCUG*CGGG*CUCUUAAGGUAG*UGAAUGGAUGAAC
- Length
- 54 nucleotides
- Bulged bases
- 3J7R|1|5|U|3818
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|5|G|3634
3J7R|1|5|A|3635
3J7R|1|5|C|3636
3J7R|1|5|U|3637
3J7R|1|5|G|3638
*
3J7R|1|5|C|3650
3J7R|1|5|A|3651
3J7R|1|5|A|3652
3J7R|1|5|A|3653
3J7R|1|5|G|3654
3J7R|1|5|C|3655
3J7R|1|5|A|3656
3J7R|1|5|U|3657
*
3J7R|1|5|A|3687
3J7R|1|5|U|3688
3J7R|1|5|G|3689
3J7R|1|5|U|3690
3J7R|1|5|G|3691
3J7R|1|5|A|3692
3J7R|1|5|U|3693
3J7R|1|5|U|3694
3J7R|1|5|U|3695
3J7R|1|5|C|3696
3J7R|1|5|U|3697
3J7R|1|5|G|3698
*
3J7R|1|5|C|3752
3J7R|1|5|G|3753
3J7R|1|5|G|3754
3J7R|1|5|G|3755
*
3J7R|1|5|C|3769
3J7R|1|5|U|3770
3J7R|1|5|C|3771
3J7R|1|5|U|3772
3J7R|1|5|U|3773
3J7R|1|5|A|3774
3J7R|1|5|A|3775
3J7R|1|5|G|3776
3J7R|1|5|G|3777
3J7R|1|5|U|3778
3J7R|1|5|A|3779
3J7R|1|5|G|3780
*
3J7R|1|5|U|3814
3J7R|1|5|G|3815
3J7R|1|5|A|3816
3J7R|1|5|A|3817
3J7R|1|5|U|3818
3J7R|1|5|G|3819
3J7R|1|5|G|3820
3J7R|1|5|A|3821
3J7R|1|5|U|3822
3J7R|1|5|G|3823
3J7R|1|5|A|3824
3J7R|1|5|A|3825
3J7R|1|5|C|3826
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL2
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain S6
- Transfer RNA; tRNA
- Chain n
- Ribosomal protein eL41
- Chain p
- Ribosomal protein eL43
Coloring options: