J6_3J7Z_001

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

3J7Z|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Z|1|A|G|45
3J7Z|1|A|G|46
*
3J7Z|1|A|C|179
3J7Z|1|A|G|180
3J7Z|1|A|A|181
3J7Z|1|A|A|182
3J7Z|1|A|C|183
*
3J7Z|1|A|G|214
3J7Z|1|A|G|215
3J7Z|1|A|A|216
3J7Z|1|A|A|217
3J7Z|1|A|A|218
3J7Z|1|A|A|219
3J7Z|1|A|G|220
3J7Z|1|A|A|221
3J7Z|1|A|A|222
3J7Z|1|A|A|223
3J7Z|1|A|U|224
*
3J7Z|1|A|A|231
3J7Z|1|A|G|232
3J7Z|1|A|A|233
3J7Z|1|A|U|234
3J7Z|1|A|U|235
*
3J7Z|1|A|A|262
3J7Z|1|A|G|263
3J7Z|1|A|C|264
3J7Z|1|A|A|265
3J7Z|1|A|G|266
*
3J7Z|1|A|C|426
3J7Z|1|A|U|427
3J7Z|1|A|A|428
3J7Z|1|A|A|429
3J7Z|1|A|A|430
3J7Z|1|A|U|431
3J7Z|1|A|A|432
3J7Z|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34