J6_3JAG_001
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 3JAG|1|5|A|66, 3JAG|1|8|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|5|G|21
3JAG|1|5|G|22
3JAG|1|5|C|23
3JAG|1|5|G|24
3JAG|1|5|A|25
3JAG|1|5|C|26
*
3JAG|1|5|G|57
3JAG|1|5|G|58
3JAG|1|5|A|59
3JAG|1|5|G|60
3JAG|1|5|A|61
3JAG|1|5|A|62
3JAG|1|5|G|63
3JAG|1|5|A|64
3JAG|1|5|A|65
3JAG|1|5|A|66
3JAG|1|5|C|67
*
3JAG|1|5|G|74
3JAG|1|5|G|75
3JAG|1|5|A|76
3JAG|1|5|U|77
3JAG|1|5|U|78
*
3JAG|1|5|A|105
3JAG|1|5|A|106
3JAG|1|5|G|107
3JAG|1|5|A|108
3JAG|1|5|G|109
*
3JAG|1|5|C|332
3JAG|1|5|U|333
3JAG|1|5|A|334
3JAG|1|5|A|335
3JAG|1|5|A|336
3JAG|1|5|U|337
3JAG|1|5|A|338
3JAG|1|5|C|339
*
3JAG|1|8|G|33
3JAG|1|8|U|34
3JAG|1|8|C|35
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain N
- eL15
- Chain h
- uL29
- Chain i
- eL36
- Chain j
- eL37
Coloring options: