J6_3JAG_003
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UUGA*UUUG*CA*UGUC*GCCUCACGAUCC*GGUGUCAGAAAA
- Length
- 38 nucleotides
- Bulged bases
- 3JAG|1|5|G|3922, 3JAG|1|5|C|4337, 3JAG|1|5|A|4376, 3JAG|1|5|A|4378, 3JAG|1|5|A|4379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|5|U|3920
3JAG|1|5|U|3921
3JAG|1|5|G|3922
3JAG|1|5|A|3923
*
3JAG|1|5|U|4188
3JAG|1|5|U|4189
3JAG|1|5|U|4190
3JAG|1|5|G|4191
*
3JAG|1|5|C|4204
3JAG|1|5|A|4205
*
3JAG|1|5|U|4227
3JAG|1|5|G|4228
3JAG|1|5|U|4229
3JAG|1|5|C|4230
*
3JAG|1|5|G|4331
3JAG|1|5|C|4332
3JAG|1|5|C|4333
3JAG|1|5|U|4334
3JAG|1|5|C|4335
3JAG|1|5|A|4336
3JAG|1|5|C|4337
3JAG|1|5|G|4338
3JAG|1|5|A|4339
3JAG|1|5|U|4340
3JAG|1|5|C|4341
3JAG|1|5|C|4342
*
3JAG|1|5|G|4370
3JAG|1|5|G|4371
3JAG|1|5|U|4372
3JAG|1|5|G|4373
3JAG|1|5|U|4374
3JAG|1|5|C|4375
3JAG|1|5|A|4376
3JAG|1|5|G|4377
3JAG|1|5|A|4378
3JAG|1|5|A|4379
3JAG|1|5|A|4380
3JAG|1|5|A|4381
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain A
- uL2
- Chain N
- eL15
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- uL15
- Chain o
- eL42
Coloring options: