J6_3JAI_001
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 3JAI|1|5|A|66, 3JAI|1|8|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAI|1|5|G|21
3JAI|1|5|G|22
3JAI|1|5|C|23
3JAI|1|5|G|24
3JAI|1|5|A|25
3JAI|1|5|C|26
*
3JAI|1|5|G|57
3JAI|1|5|G|58
3JAI|1|5|A|59
3JAI|1|5|G|60
3JAI|1|5|A|61
3JAI|1|5|A|62
3JAI|1|5|G|63
3JAI|1|5|A|64
3JAI|1|5|A|65
3JAI|1|5|A|66
3JAI|1|5|C|67
*
3JAI|1|5|G|74
3JAI|1|5|G|75
3JAI|1|5|A|76
3JAI|1|5|U|77
3JAI|1|5|U|78
*
3JAI|1|5|A|105
3JAI|1|5|A|106
3JAI|1|5|G|107
3JAI|1|5|A|108
3JAI|1|5|G|109
*
3JAI|1|5|C|332
3JAI|1|5|U|333
3JAI|1|5|A|334
3JAI|1|5|A|335
3JAI|1|5|A|336
3JAI|1|5|U|337
3JAI|1|5|A|338
3JAI|1|5|C|339
*
3JAI|1|8|G|33
3JAI|1|8|U|34
3JAI|1|8|C|35
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain N
- eL15
- Chain h
- uL29
- Chain i
- eL36
- Chain j
- eL37
Coloring options: