J6_3JCD_001
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAGG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUACUCCU
- Length
- 43 nucleotides
- Bulged bases
- 3JCD|1|A|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCD|1|A|A|42
3JCD|1|A|G|43
3JCD|1|A|A|44
3JCD|1|A|G|45
3JCD|1|A|G|46
*
3JCD|1|A|C|179
3JCD|1|A|G|180
3JCD|1|A|A|181
3JCD|1|A|A|182
3JCD|1|A|C|183
*
3JCD|1|A|G|214
3JCD|1|A|G|215
3JCD|1|A|A|216
3JCD|1|A|A|217
3JCD|1|A|A|218
3JCD|1|A|A|219
3JCD|1|A|G|220
3JCD|1|A|A|221
3JCD|1|A|A|222
3JCD|1|A|A|223
3JCD|1|A|U|224
*
3JCD|1|A|A|231
3JCD|1|A|G|232
3JCD|1|A|A|233
3JCD|1|A|U|234
3JCD|1|A|U|235
*
3JCD|1|A|A|262
3JCD|1|A|G|263
3JCD|1|A|C|264
3JCD|1|A|A|265
3JCD|1|A|G|266
*
3JCD|1|A|C|426
3JCD|1|A|U|427
3JCD|1|A|A|428
3JCD|1|A|A|429
3JCD|1|A|A|430
3JCD|1|A|U|431
3JCD|1|A|A|432
3JCD|1|A|C|433
3JCD|1|A|U|434
3JCD|1|A|C|435
3JCD|1|A|C|436
3JCD|1|A|U|437
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: