3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
Length
36 nucleotides
Bulged bases
4LNT|1|YA|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LNT|1|YA|G|45
4LNT|1|YA|C|46
*
4LNT|1|YA|G|179
4LNT|1|YA|G|180
4LNT|1|YA|A|181
4LNT|1|YA|A|182
4LNT|1|YA|C|183
*
4LNT|1|YA|G|214
4LNT|1|YA|G|215
4LNT|1|YA|A|216
4LNT|1|YA|G|217
4LNT|1|YA|A|218
4LNT|1|YA|G|219
4LNT|1|YA|G|220
4LNT|1|YA|A|221
4LNT|1|YA|A|222
4LNT|1|YA|A|223
4LNT|1|YA|G|224
*
4LNT|1|YA|C|231
4LNT|1|YA|G|232
4LNT|1|YA|A|233
4LNT|1|YA|C|234
4LNT|1|YA|U|235
*
4LNT|1|YA|A|262
4LNT|1|YA|C|263
4LNT|1|YA|C|264
4LNT|1|YA|A|265
4LNT|1|YA|G|266
*
4LNT|1|YA|C|426
4LNT|1|YA|U|427
4LNT|1|YA|A|428
4LNT|1|YA|A|429
4LNT|1|YA|G|430
4LNT|1|YA|U|431
4LNT|1|YA|A|432
4LNT|1|YA|C|433

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y7
50S ribosomal protein L34

Coloring options:

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