J6_4P6F_003
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 4P6F|1|YA|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4P6F|1|YA|G|45
4P6F|1|YA|C|46
*
4P6F|1|YA|G|179
4P6F|1|YA|G|180
4P6F|1|YA|A|181
4P6F|1|YA|A|182
4P6F|1|YA|C|183
*
4P6F|1|YA|G|214
4P6F|1|YA|G|215
4P6F|1|YA|A|216
4P6F|1|YA|G|217
4P6F|1|YA|A|218
4P6F|1|YA|G|219
4P6F|1|YA|G|220
4P6F|1|YA|A|221
4P6F|1|YA|A|222
4P6F|1|YA|A|223
4P6F|1|YA|G|224
*
4P6F|1|YA|C|231
4P6F|1|YA|G|232
4P6F|1|YA|A|233
4P6F|1|YA|C|234
4P6F|1|YA|U|235
*
4P6F|1|YA|A|262
4P6F|1|YA|C|263
4P6F|1|YA|C|264
4P6F|1|YA|A|265
4P6F|1|YA|G|266
*
4P6F|1|YA|C|426
4P6F|1|YA|U|427
4P6F|1|YA|A|428
4P6F|1|YA|A|429
4P6F|1|YA|G|430
4P6F|1|YA|U|431
4P6F|1|YA|A|432
4P6F|1|YA|C|433
Current chains
- Chain YA
- 23S ribosomal RNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
Coloring options: