J6_4TUD_002
3D structure
- PDB id
- 4TUD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 4TUD|1|RA|U|2076, 4TUD|1|RA|A|2388, 4TUD|1|RA|U|2390, 4TUD|1|RA|G|2428, 4TUD|1|RA|A|2430, 4TUD|1|RA|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4TUD|1|RA|U|2074
4TUD|1|RA|U|2075
4TUD|1|RA|U|2076
4TUD|1|RA|A|2077
*
4TUD|1|RA|U|2243
4TUD|1|RA|U|2244
4TUD|1|RA|U|2245
4TUD|1|RA|G|2246
*
4TUD|1|RA|C|2258
4TUD|1|RA|G|2259
*
4TUD|1|RA|C|2281
4TUD|1|RA|G|2282
4TUD|1|RA|C|2283
4TUD|1|RA|C|2284
*
4TUD|1|RA|G|2384
4TUD|1|RA|C|2385
4TUD|1|RA|C|2386
4TUD|1|RA|U|2387
4TUD|1|RA|A|2388
4TUD|1|RA|G|2389
4TUD|1|RA|U|2390
4TUD|1|RA|G|2391
4TUD|1|RA|A|2392
4TUD|1|RA|A|2393
4TUD|1|RA|C|2394
4TUD|1|RA|C|2395
*
4TUD|1|RA|G|2421
4TUD|1|RA|A|2422
4TUD|1|RA|U|2423
4TUD|1|RA|C|2424
4TUD|1|RA|A|2425
4TUD|1|RA|A|2426
4TUD|1|RA|C|2427
4TUD|1|RA|G|2428
4TUD|1|RA|G|2429
4TUD|1|RA|A|2430
4TUD|1|RA|U|2431
4TUD|1|RA|A|2432
4TUD|1|RA|A|2433
4TUD|1|RA|A|2434
4TUD|1|RA|A|2435
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain R1
- 50S ribosomal protein L28
- Chain R6
- 50S ribosomal protein L33
- Chain R8
- 50S ribosomal protein L35
- Chain RD
- 50S ribosomal protein L2
- Chain RP
- 50S ribosomal protein L15
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