J6_4U1U_001

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4U1U|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1U|1|BA|G|45
4U1U|1|BA|G|46
*
4U1U|1|BA|C|179
4U1U|1|BA|G|180
4U1U|1|BA|A|181
4U1U|1|BA|A|182
4U1U|1|BA|C|183
*
4U1U|1|BA|G|214
4U1U|1|BA|G|215
4U1U|1|BA|A|216
4U1U|1|BA|A|217
4U1U|1|BA|A|218
4U1U|1|BA|A|219
4U1U|1|BA|G|220
4U1U|1|BA|A|221
4U1U|1|BA|A|222
4U1U|1|BA|A|223
4U1U|1|BA|U|224
*
4U1U|1|BA|A|231
4U1U|1|BA|G|232
4U1U|1|BA|A|233
4U1U|1|BA|U|234
4U1U|1|BA|U|235
*
4U1U|1|BA|A|262
4U1U|1|BA|G|263
4U1U|1|BA|C|264
4U1U|1|BA|A|265
4U1U|1|BA|G|266
*
4U1U|1|BA|C|426
4U1U|1|BA|U|427
4U1U|1|BA|A|428
4U1U|1|BA|A|429
4U1U|1|BA|A|430
4U1U|1|BA|U|431
4U1U|1|BA|A|432
4U1U|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B2

50S ribosomal protein L34