J6_4U27_005

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4U27|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|G|45
4U27|1|DA|G|46
*
4U27|1|DA|C|179
4U27|1|DA|G|180
4U27|1|DA|A|181
4U27|1|DA|A|182
4U27|1|DA|C|183
*
4U27|1|DA|G|214
4U27|1|DA|G|215
4U27|1|DA|A|216
4U27|1|DA|A|217
4U27|1|DA|A|218
4U27|1|DA|A|219
4U27|1|DA|G|220
4U27|1|DA|A|221
4U27|1|DA|A|222
4U27|1|DA|A|223
4U27|1|DA|U|224
*
4U27|1|DA|A|231
4U27|1|DA|G|232
4U27|1|DA|A|233
4U27|1|DA|U|234
4U27|1|DA|U|235
*
4U27|1|DA|A|262
4U27|1|DA|G|263
4U27|1|DA|C|264
4U27|1|DA|A|265
4U27|1|DA|G|266
*
4U27|1|DA|C|426
4U27|1|DA|U|427
4U27|1|DA|A|428
4U27|1|DA|A|429
4U27|1|DA|A|430
4U27|1|DA|U|431
4U27|1|DA|A|432
4U27|1|DA|C|433

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34