J6_4U67_002
3D structure
- PDB id
- 4U67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCCC*GGCUUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 43 nucleotides
- Bulged bases
- 4U67|1|X|U|2059, 4U67|1|X|A|2367, 4U67|1|X|G|2407, 4U67|1|X|A|2409, 4U67|1|X|U|2410
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U67|1|X|U|2057
4U67|1|X|U|2058
4U67|1|X|U|2059
4U67|1|X|A|2060
*
4U67|1|X|U|2222
4U67|1|X|U|2223
4U67|1|X|U|2224
4U67|1|X|G|2225
*
4U67|1|X|C|2237
4U67|1|X|G|2238
*
4U67|1|X|C|2260
4U67|1|X|G|2261
4U67|1|X|C|2262
4U67|1|X|C|2263
4U67|1|X|C|2264
*
4U67|1|X|G|2362
4U67|1|X|G|2363
4U67|1|X|C|2364
4U67|1|X|U|2365
4U67|1|X|U|2366
4U67|1|X|A|2367
4U67|1|X|G|2368
4U67|1|X|U|2369
4U67|1|X|G|2370
4U67|1|X|A|2371
4U67|1|X|A|2372
4U67|1|X|C|2373
4U67|1|X|C|2374
*
4U67|1|X|G|2400
4U67|1|X|A|2401
4U67|1|X|U|2402
4U67|1|X|C|2403
4U67|1|X|A|2404
4U67|1|X|A|2405
4U67|1|X|C|2406
4U67|1|X|G|2407
4U67|1|X|G|2408
4U67|1|X|A|2409
4U67|1|X|U|2410
4U67|1|X|A|2411
4U67|1|X|A|2412
4U67|1|X|A|2413
4U67|1|X|A|2414
Current chains
- Chain X
- 23s RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain A
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L15
- Chain T
- 50S ribosomal protein L27
- Chain U
- 50S ribosomal protein L28
Coloring options: