J6_4V4R_001

3D structure

PDB id

4V4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

5.9 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V4R|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4R|1|BA|G|45
4V4R|1|BA|C|46
*
4V4R|1|BA|G|179
4V4R|1|BA|G|180
4V4R|1|BA|A|181
4V4R|1|BA|A|182
4V4R|1|BA|C|183
*
4V4R|1|BA|G|214
4V4R|1|BA|G|215
4V4R|1|BA|A|216
4V4R|1|BA|G|217
4V4R|1|BA|A|218
4V4R|1|BA|G|219
4V4R|1|BA|G|220
4V4R|1|BA|A|221
4V4R|1|BA|A|222
4V4R|1|BA|A|223
4V4R|1|BA|G|224
*
4V4R|1|BA|C|231
4V4R|1|BA|G|232
4V4R|1|BA|A|233
4V4R|1|BA|C|234
4V4R|1|BA|U|235
*
4V4R|1|BA|A|262
4V4R|1|BA|C|263
4V4R|1|BA|C|264
4V4R|1|BA|A|265
4V4R|1|BA|G|266
*
4V4R|1|BA|C|426
4V4R|1|BA|U|427
4V4R|1|BA|A|428
4V4R|1|BA|A|429
4V4R|1|BA|G|430
4V4R|1|BA|U|431
4V4R|1|BA|A|432
4V4R|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B7

50S ribosomal protein L34

Chain BF

50S ribosomal protein L4