J6_4V50_001

3D structure

PDB id

4V50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V50|1|BB|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V50|1|BB|G|45
4V50|1|BB|G|46
*
4V50|1|BB|C|179
4V50|1|BB|G|180
4V50|1|BB|A|181
4V50|1|BB|A|182
4V50|1|BB|C|183
*
4V50|1|BB|G|214
4V50|1|BB|G|215
4V50|1|BB|A|216
4V50|1|BB|A|217
4V50|1|BB|A|218
4V50|1|BB|A|219
4V50|1|BB|G|220
4V50|1|BB|A|221
4V50|1|BB|A|222
4V50|1|BB|A|223
4V50|1|BB|U|224
*
4V50|1|BB|A|231
4V50|1|BB|G|232
4V50|1|BB|A|233
4V50|1|BB|U|234
4V50|1|BB|U|235
*
4V50|1|BB|A|262
4V50|1|BB|G|263
4V50|1|BB|C|264
4V50|1|BB|A|265
4V50|1|BB|G|266
*
4V50|1|BB|C|426
4V50|1|BB|U|427
4V50|1|BB|A|428
4V50|1|BB|A|429
4V50|1|BB|A|430
4V50|1|BB|U|431
4V50|1|BB|A|432
4V50|1|BB|C|433

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34