J6_4V51_001

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V51|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|BA|G|44
4V51|1|BA|C|45
*
4V51|1|BA|G|179
4V51|1|BA|G|180
4V51|1|BA|A|181
4V51|1|BA|A|182
4V51|1|BA|C|183
*
4V51|1|BA|G|214
4V51|1|BA|G|215
4V51|1|BA|A|216
4V51|1|BA|G|217
4V51|1|BA|A|218
4V51|1|BA|G|219
4V51|1|BA|G|220
4V51|1|BA|A|221
4V51|1|BA|A|222
4V51|1|BA|A|223
4V51|1|BA|G|224
*
4V51|1|BA|C|231
4V51|1|BA|G|232
4V51|1|BA|A|233
4V51|1|BA|C|234
4V51|1|BA|U|235
*
4V51|1|BA|A|262
4V51|1|BA|C|263
4V51|1|BA|C|264
4V51|1|BA|A|265
4V51|1|BA|G|266
*
4V51|1|BA|C|426
4V51|1|BA|U|427
4V51|1|BA|A|428
4V51|1|BA|A|429
4V51|1|BA|G|430
4V51|1|BA|U|431
4V51|1|BA|A|432
4V51|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34