J6_4V5P_001

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V5P|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|BA|G|44
4V5P|1|BA|C|45
*
4V5P|1|BA|G|179
4V5P|1|BA|G|180
4V5P|1|BA|A|181
4V5P|1|BA|A|182
4V5P|1|BA|C|183
*
4V5P|1|BA|G|214
4V5P|1|BA|G|215
4V5P|1|BA|A|216
4V5P|1|BA|G|217
4V5P|1|BA|A|218
4V5P|1|BA|G|219
4V5P|1|BA|G|220
4V5P|1|BA|A|221
4V5P|1|BA|A|222
4V5P|1|BA|A|223
4V5P|1|BA|G|224
*
4V5P|1|BA|C|231
4V5P|1|BA|G|232
4V5P|1|BA|A|233
4V5P|1|BA|C|234
4V5P|1|BA|U|235
*
4V5P|1|BA|A|262
4V5P|1|BA|C|263
4V5P|1|BA|C|264
4V5P|1|BA|A|265
4V5P|1|BA|G|266
*
4V5P|1|BA|C|426
4V5P|1|BA|U|427
4V5P|1|BA|A|428
4V5P|1|BA|A|429
4V5P|1|BA|G|430
4V5P|1|BA|U|431
4V5P|1|BA|A|432
4V5P|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34