J6_4V5S_001

3D structure

PDB id

4V5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V5S|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5S|1|BA|G|44
4V5S|1|BA|C|45
*
4V5S|1|BA|G|179
4V5S|1|BA|G|180
4V5S|1|BA|A|181
4V5S|1|BA|A|182
4V5S|1|BA|C|183
*
4V5S|1|BA|G|214
4V5S|1|BA|G|215
4V5S|1|BA|A|216
4V5S|1|BA|G|217
4V5S|1|BA|A|218
4V5S|1|BA|G|219
4V5S|1|BA|G|220
4V5S|1|BA|A|221
4V5S|1|BA|A|222
4V5S|1|BA|A|223
4V5S|1|BA|G|224
*
4V5S|1|BA|C|231
4V5S|1|BA|G|232
4V5S|1|BA|A|233
4V5S|1|BA|C|234
4V5S|1|BA|U|235
*
4V5S|1|BA|A|262
4V5S|1|BA|C|263
4V5S|1|BA|C|264
4V5S|1|BA|A|265
4V5S|1|BA|G|266
*
4V5S|1|BA|C|426
4V5S|1|BA|U|427
4V5S|1|BA|A|428
4V5S|1|BA|A|429
4V5S|1|BA|G|430
4V5S|1|BA|U|431
4V5S|1|BA|A|432
4V5S|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34