J6_4V64_001

3D structure

PDB id

4V64 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V64|1|BB|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V64|1|BB|G|45
4V64|1|BB|G|46
*
4V64|1|BB|C|179
4V64|1|BB|G|180
4V64|1|BB|A|181
4V64|1|BB|A|182
4V64|1|BB|C|183
*
4V64|1|BB|G|214
4V64|1|BB|G|215
4V64|1|BB|A|216
4V64|1|BB|A|217
4V64|1|BB|A|218
4V64|1|BB|A|219
4V64|1|BB|G|220
4V64|1|BB|A|221
4V64|1|BB|A|222
4V64|1|BB|A|223
4V64|1|BB|U|224
*
4V64|1|BB|A|231
4V64|1|BB|G|232
4V64|1|BB|A|233
4V64|1|BB|U|234
4V64|1|BB|U|235
*
4V64|1|BB|A|262
4V64|1|BB|G|263
4V64|1|BB|C|264
4V64|1|BB|A|265
4V64|1|BB|G|266
*
4V64|1|BB|C|426
4V64|1|BB|U|427
4V64|1|BB|A|428
4V64|1|BB|A|429
4V64|1|BB|A|430
4V64|1|BB|U|431
4V64|1|BB|A|432
4V64|1|BB|C|433

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34