J6_4V6A_001

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GC*GGAACC*GAGGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

39 nucleotides

Bulged bases

4V6A|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|BA|G|44
4V6A|1|BA|C|45
*
4V6A|1|BA|G|179
4V6A|1|BA|G|180
4V6A|1|BA|A|181
4V6A|1|BA|A|182
4V6A|1|BA|C|183
4V6A|1|BA|C|184
*
4V6A|1|BA|G|212
4V6A|1|BA|A|213
4V6A|1|BA|G|214
4V6A|1|BA|G|215
4V6A|1|BA|A|216
4V6A|1|BA|G|217
4V6A|1|BA|A|218
4V6A|1|BA|G|219
4V6A|1|BA|G|220
4V6A|1|BA|A|221
4V6A|1|BA|A|222
4V6A|1|BA|A|223
4V6A|1|BA|G|224
*
4V6A|1|BA|C|231
4V6A|1|BA|G|232
4V6A|1|BA|A|233
4V6A|1|BA|C|234
4V6A|1|BA|U|235
*
4V6A|1|BA|A|262
4V6A|1|BA|C|263
4V6A|1|BA|C|264
4V6A|1|BA|A|265
4V6A|1|BA|G|266
*
4V6A|1|BA|C|426
4V6A|1|BA|U|427
4V6A|1|BA|A|428
4V6A|1|BA|A|429
4V6A|1|BA|G|430
4V6A|1|BA|U|431
4V6A|1|BA|A|432
4V6A|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B7

50S ribosomal protein L34