J6_4V6G_003

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V6G|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6G|1|DA|G|45
4V6G|1|DA|C|46
*
4V6G|1|DA|G|179
4V6G|1|DA|G|180
4V6G|1|DA|A|181
4V6G|1|DA|A|182
4V6G|1|DA|C|183
*
4V6G|1|DA|G|214
4V6G|1|DA|G|215
4V6G|1|DA|A|216
4V6G|1|DA|G|217
4V6G|1|DA|A|218
4V6G|1|DA|G|219
4V6G|1|DA|G|220
4V6G|1|DA|A|221
4V6G|1|DA|A|222
4V6G|1|DA|A|223
4V6G|1|DA|G|224
*
4V6G|1|DA|C|231
4V6G|1|DA|G|232
4V6G|1|DA|A|233
4V6G|1|DA|C|234
4V6G|1|DA|U|235
*
4V6G|1|DA|A|262
4V6G|1|DA|C|263
4V6G|1|DA|C|264
4V6G|1|DA|A|265
4V6G|1|DA|G|266
*
4V6G|1|DA|C|426
4V6G|1|DA|U|427
4V6G|1|DA|A|428
4V6G|1|DA|A|429
4V6G|1|DA|G|430
4V6G|1|DA|U|431
4V6G|1|DA|A|432
4V6G|1|DA|C|433

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S ribosomal protein L34