J6_4V7K_001

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V7K|1|AA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|AA|G|44
4V7K|1|AA|C|45
*
4V7K|1|AA|G|179
4V7K|1|AA|G|180
4V7K|1|AA|A|181
4V7K|1|AA|A|182
4V7K|1|AA|C|183
*
4V7K|1|AA|G|214
4V7K|1|AA|G|215
4V7K|1|AA|A|216
4V7K|1|AA|G|217
4V7K|1|AA|A|218
4V7K|1|AA|G|219
4V7K|1|AA|G|220
4V7K|1|AA|A|221
4V7K|1|AA|A|222
4V7K|1|AA|A|223
4V7K|1|AA|G|224
*
4V7K|1|AA|C|231
4V7K|1|AA|G|232
4V7K|1|AA|A|233
4V7K|1|AA|C|234
4V7K|1|AA|U|235
*
4V7K|1|AA|A|262
4V7K|1|AA|C|263
4V7K|1|AA|C|264
4V7K|1|AA|A|265
4V7K|1|AA|G|266
*
4V7K|1|AA|C|426
4V7K|1|AA|U|427
4V7K|1|AA|A|428
4V7K|1|AA|A|429
4V7K|1|AA|G|430
4V7K|1|AA|U|431
4V7K|1|AA|A|432
4V7K|1|AA|C|433

Current chains

Chain AA

RNA (2848-MER)

Nearby chains

Chain A7

50S ribosomal protein L34