J6_4V7T_003

3D structure

PDB id

4V7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

4V7T|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7T|1|DA|G|45
4V7T|1|DA|G|46
*
4V7T|1|DA|C|179
4V7T|1|DA|G|180
4V7T|1|DA|A|181
4V7T|1|DA|A|182
4V7T|1|DA|C|183
*
4V7T|1|DA|G|214
4V7T|1|DA|G|215
4V7T|1|DA|A|216
4V7T|1|DA|A|217
4V7T|1|DA|A|218
4V7T|1|DA|A|219
4V7T|1|DA|G|220
4V7T|1|DA|A|221
4V7T|1|DA|A|222
4V7T|1|DA|A|223
4V7T|1|DA|U|224
*
4V7T|1|DA|A|231
4V7T|1|DA|G|232
4V7T|1|DA|A|233
4V7T|1|DA|U|234
4V7T|1|DA|U|235
4V7T|1|DA|C|236
*
4V7T|1|DA|G|261
4V7T|1|DA|A|262
4V7T|1|DA|G|263
4V7T|1|DA|C|264
4V7T|1|DA|A|265
4V7T|1|DA|G|266
*
4V7T|1|DA|C|426
4V7T|1|DA|U|427
4V7T|1|DA|A|428
4V7T|1|DA|A|429
4V7T|1|DA|A|430
4V7T|1|DA|U|431
4V7T|1|DA|A|432
4V7T|1|DA|C|433

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34