J6_4V7U_004

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V7U|1|DA|A|223, 4V7U|1|DA|U|431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DA|G|45
4V7U|1|DA|G|46
*
4V7U|1|DA|C|179
4V7U|1|DA|G|180
4V7U|1|DA|A|181
4V7U|1|DA|A|182
4V7U|1|DA|C|183
*
4V7U|1|DA|G|214
4V7U|1|DA|G|215
4V7U|1|DA|A|216
4V7U|1|DA|A|217
4V7U|1|DA|A|218
4V7U|1|DA|A|219
4V7U|1|DA|G|220
4V7U|1|DA|A|221
4V7U|1|DA|A|222
4V7U|1|DA|A|223
4V7U|1|DA|U|224
*
4V7U|1|DA|A|231
4V7U|1|DA|G|232
4V7U|1|DA|A|233
4V7U|1|DA|U|234
4V7U|1|DA|U|235
*
4V7U|1|DA|A|262
4V7U|1|DA|G|263
4V7U|1|DA|C|264
4V7U|1|DA|A|265
4V7U|1|DA|G|266
*
4V7U|1|DA|C|426
4V7U|1|DA|U|427
4V7U|1|DA|A|428
4V7U|1|DA|A|429
4V7U|1|DA|A|430
4V7U|1|DA|U|431
4V7U|1|DA|A|432
4V7U|1|DA|C|433

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34