J6_4V7Y_001

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V7Y|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7Y|1|BA|G|44
4V7Y|1|BA|C|45
*
4V7Y|1|BA|G|179
4V7Y|1|BA|G|180
4V7Y|1|BA|A|181
4V7Y|1|BA|A|182
4V7Y|1|BA|C|183
*
4V7Y|1|BA|G|214
4V7Y|1|BA|G|215
4V7Y|1|BA|A|216
4V7Y|1|BA|G|217
4V7Y|1|BA|A|218
4V7Y|1|BA|G|219
4V7Y|1|BA|G|220
4V7Y|1|BA|A|221
4V7Y|1|BA|A|222
4V7Y|1|BA|A|223
4V7Y|1|BA|G|224
*
4V7Y|1|BA|C|231
4V7Y|1|BA|G|232
4V7Y|1|BA|A|233
4V7Y|1|BA|C|234
4V7Y|1|BA|U|235
*
4V7Y|1|BA|A|262
4V7Y|1|BA|C|263
4V7Y|1|BA|C|264
4V7Y|1|BA|A|265
4V7Y|1|BA|G|266
*
4V7Y|1|BA|C|426
4V7Y|1|BA|U|427
4V7Y|1|BA|A|428
4V7Y|1|BA|A|429
4V7Y|1|BA|G|430
4V7Y|1|BA|U|431
4V7Y|1|BA|A|432
4V7Y|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B7

50S ribosomal protein L34