J6_4V89_001

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V89|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V89|1|BA|G|45
4V89|1|BA|G|46
*
4V89|1|BA|C|179
4V89|1|BA|G|180
4V89|1|BA|A|181
4V89|1|BA|A|182
4V89|1|BA|C|183
*
4V89|1|BA|G|214
4V89|1|BA|G|215
4V89|1|BA|A|216
4V89|1|BA|A|217
4V89|1|BA|A|218
4V89|1|BA|A|219
4V89|1|BA|G|220
4V89|1|BA|A|221
4V89|1|BA|A|222
4V89|1|BA|A|223
4V89|1|BA|U|224
*
4V89|1|BA|A|231
4V89|1|BA|G|232
4V89|1|BA|A|233
4V89|1|BA|U|234
4V89|1|BA|U|235
*
4V89|1|BA|A|262
4V89|1|BA|G|263
4V89|1|BA|C|264
4V89|1|BA|A|265
4V89|1|BA|G|266
*
4V89|1|BA|C|426
4V89|1|BA|U|427
4V89|1|BA|A|428
4V89|1|BA|A|429
4V89|1|BA|A|430
4V89|1|BA|U|431
4V89|1|BA|A|432
4V89|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B6

50S ribosomal protein L34