J6_4V8B_001

3D structure

PDB id

4V8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V8B|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8B|1|BA|G|45
4V8B|1|BA|C|46
*
4V8B|1|BA|G|179
4V8B|1|BA|G|180
4V8B|1|BA|A|181
4V8B|1|BA|A|182
4V8B|1|BA|C|183
*
4V8B|1|BA|G|214
4V8B|1|BA|G|215
4V8B|1|BA|A|216
4V8B|1|BA|G|217
4V8B|1|BA|A|218
4V8B|1|BA|G|219
4V8B|1|BA|G|220
4V8B|1|BA|A|221
4V8B|1|BA|A|222
4V8B|1|BA|A|223
4V8B|1|BA|G|224
*
4V8B|1|BA|C|231
4V8B|1|BA|G|232
4V8B|1|BA|A|233
4V8B|1|BA|C|234
4V8B|1|BA|U|235
*
4V8B|1|BA|A|262
4V8B|1|BA|C|263
4V8B|1|BA|C|264
4V8B|1|BA|A|265
4V8B|1|BA|G|266
*
4V8B|1|BA|C|426
4V8B|1|BA|U|427
4V8B|1|BA|A|428
4V8B|1|BA|A|429
4V8B|1|BA|G|430
4V8B|1|BA|U|431
4V8B|1|BA|A|432
4V8B|1|BA|C|433

Current chains

Chain BA

RNA (2912-MER)

Nearby chains

Chain B7

50S ribosomal protein L34