J6_4V8O_002

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V8O|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|BA|G|44
4V8O|1|BA|C|45
*
4V8O|1|BA|G|179
4V8O|1|BA|G|180
4V8O|1|BA|A|181
4V8O|1|BA|A|182
4V8O|1|BA|C|183
*
4V8O|1|BA|G|214
4V8O|1|BA|G|215
4V8O|1|BA|A|216
4V8O|1|BA|G|217
4V8O|1|BA|A|218
4V8O|1|BA|G|219
4V8O|1|BA|G|220
4V8O|1|BA|A|221
4V8O|1|BA|A|222
4V8O|1|BA|A|223
4V8O|1|BA|G|224
*
4V8O|1|BA|C|231
4V8O|1|BA|G|232
4V8O|1|BA|A|233
4V8O|1|BA|C|234
4V8O|1|BA|U|235
*
4V8O|1|BA|A|262
4V8O|1|BA|C|263
4V8O|1|BA|C|264
4V8O|1|BA|A|265
4V8O|1|BA|G|266
*
4V8O|1|BA|C|426
4V8O|1|BA|U|427
4V8O|1|BA|A|428
4V8O|1|BA|A|429
4V8O|1|BA|G|430
4V8O|1|BA|U|431
4V8O|1|BA|A|432
4V8O|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34