J6_4V90_001

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V90|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V90|1|BA|G|44
4V90|1|BA|C|45
*
4V90|1|BA|G|179
4V90|1|BA|G|180
4V90|1|BA|A|181
4V90|1|BA|A|182
4V90|1|BA|C|183
*
4V90|1|BA|G|214
4V90|1|BA|G|215
4V90|1|BA|A|216
4V90|1|BA|G|217
4V90|1|BA|A|218
4V90|1|BA|G|219
4V90|1|BA|G|220
4V90|1|BA|A|221
4V90|1|BA|A|222
4V90|1|BA|A|223
4V90|1|BA|G|224
*
4V90|1|BA|C|231
4V90|1|BA|G|232
4V90|1|BA|A|233
4V90|1|BA|C|234
4V90|1|BA|U|235
*
4V90|1|BA|A|262
4V90|1|BA|C|263
4V90|1|BA|C|264
4V90|1|BA|A|265
4V90|1|BA|G|266
*
4V90|1|BA|C|426
4V90|1|BA|U|427
4V90|1|BA|A|428
4V90|1|BA|A|429
4V90|1|BA|G|430
4V90|1|BA|U|431
4V90|1|BA|A|432
4V90|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34