J6_4V9D_001

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V9D|1|CA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|CA|G|45
4V9D|1|CA|G|46
*
4V9D|1|CA|C|179
4V9D|1|CA|G|180
4V9D|1|CA|A|181
4V9D|1|CA|A|182
4V9D|1|CA|C|183
*
4V9D|1|CA|G|214
4V9D|1|CA|G|215
4V9D|1|CA|A|216
4V9D|1|CA|A|217
4V9D|1|CA|A|218
4V9D|1|CA|A|219
4V9D|1|CA|G|220
4V9D|1|CA|A|221
4V9D|1|CA|A|222
4V9D|1|CA|A|223
4V9D|1|CA|U|224
*
4V9D|1|CA|A|231
4V9D|1|CA|G|232
4V9D|1|CA|A|233
4V9D|1|CA|U|234
4V9D|1|CA|U|235
*
4V9D|1|CA|A|262
4V9D|1|CA|G|263
4V9D|1|CA|C|264
4V9D|1|CA|A|265
4V9D|1|CA|G|266
*
4V9D|1|CA|C|426
4V9D|1|CA|U|427
4V9D|1|CA|A|428
4V9D|1|CA|A|429
4V9D|1|CA|A|430
4V9D|1|CA|U|431
4V9D|1|CA|A|432
4V9D|1|CA|C|433

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C2

50S ribosomal protein L34