J6_4V9P_005

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V9P|1|EA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9P|1|EA|G|45
4V9P|1|EA|G|46
*
4V9P|1|EA|C|179
4V9P|1|EA|G|180
4V9P|1|EA|A|181
4V9P|1|EA|A|182
4V9P|1|EA|C|183
*
4V9P|1|EA|G|214
4V9P|1|EA|G|215
4V9P|1|EA|A|216
4V9P|1|EA|A|217
4V9P|1|EA|A|218
4V9P|1|EA|A|219
4V9P|1|EA|G|220
4V9P|1|EA|A|221
4V9P|1|EA|A|222
4V9P|1|EA|A|223
4V9P|1|EA|U|224
*
4V9P|1|EA|A|231
4V9P|1|EA|G|232
4V9P|1|EA|A|233
4V9P|1|EA|U|234
4V9P|1|EA|U|235
*
4V9P|1|EA|A|262
4V9P|1|EA|G|263
4V9P|1|EA|C|264
4V9P|1|EA|A|265
4V9P|1|EA|G|266
*
4V9P|1|EA|C|426
4V9P|1|EA|U|427
4V9P|1|EA|A|428
4V9P|1|EA|A|429
4V9P|1|EA|A|430
4V9P|1|EA|U|431
4V9P|1|EA|A|432
4V9P|1|EA|C|433

Current chains

Chain EA

23S rRNA

Nearby chains

Chain E2

50S ribosomal protein L34