J6_4W2F_001

3D structure

PDB id

4W2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4W2F|1|BA|A|212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2F|1|BA|G|44
4W2F|1|BA|C|45
*
4W2F|1|BA|G|168
4W2F|1|BA|G|169
4W2F|1|BA|A|170
4W2F|1|BA|A|171
4W2F|1|BA|C|172
*
4W2F|1|BA|G|203
4W2F|1|BA|G|204
4W2F|1|BA|A|205
4W2F|1|BA|G|206
4W2F|1|BA|A|207
4W2F|1|BA|G|208
4W2F|1|BA|G|209
4W2F|1|BA|A|210
4W2F|1|BA|A|211
4W2F|1|BA|A|212
4W2F|1|BA|G|213
*
4W2F|1|BA|C|220
4W2F|1|BA|G|221
4W2F|1|BA|A|222
4W2F|1|BA|C|223
4W2F|1|BA|U|224
*
4W2F|1|BA|A|251
4W2F|1|BA|C|252
4W2F|1|BA|C|253
4W2F|1|BA|A|254
4W2F|1|BA|G|255
*
4W2F|1|BA|C|453
4W2F|1|BA|U|454
4W2F|1|BA|A|455
4W2F|1|BA|A|456
4W2F|1|BA|G|457
4W2F|1|BA|U|458
4W2F|1|BA|A|459
4W2F|1|BA|C|460

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain B7

50S Ribosomal Protein L34