J6_4W2H_001

3D structure

PDB id

4W2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4W2H|1|BA|A|212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2H|1|BA|G|44
4W2H|1|BA|C|45
*
4W2H|1|BA|G|168
4W2H|1|BA|G|169
4W2H|1|BA|A|170
4W2H|1|BA|A|171
4W2H|1|BA|C|172
*
4W2H|1|BA|G|203
4W2H|1|BA|G|204
4W2H|1|BA|A|205
4W2H|1|BA|G|206
4W2H|1|BA|A|207
4W2H|1|BA|G|208
4W2H|1|BA|G|209
4W2H|1|BA|A|210
4W2H|1|BA|A|211
4W2H|1|BA|A|212
4W2H|1|BA|G|213
*
4W2H|1|BA|C|220
4W2H|1|BA|G|221
4W2H|1|BA|A|222
4W2H|1|BA|C|223
4W2H|1|BA|U|224
*
4W2H|1|BA|A|251
4W2H|1|BA|C|252
4W2H|1|BA|C|253
4W2H|1|BA|A|254
4W2H|1|BA|G|255
*
4W2H|1|BA|C|453
4W2H|1|BA|U|454
4W2H|1|BA|A|455
4W2H|1|BA|A|456
4W2H|1|BA|G|457
4W2H|1|BA|U|458
4W2H|1|BA|A|459
4W2H|1|BA|C|460

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain B7

50S Ribosomal Protein L34