J6_4W4G_003

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4W4G|1|YA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W4G|1|YA|G|45
4W4G|1|YA|C|46
*
4W4G|1|YA|G|179
4W4G|1|YA|G|180
4W4G|1|YA|A|181
4W4G|1|YA|A|182
4W4G|1|YA|C|183
*
4W4G|1|YA|G|214
4W4G|1|YA|G|215
4W4G|1|YA|A|216
4W4G|1|YA|G|217
4W4G|1|YA|A|218
4W4G|1|YA|G|219
4W4G|1|YA|G|220
4W4G|1|YA|A|221
4W4G|1|YA|A|222
4W4G|1|YA|A|223
4W4G|1|YA|G|224
*
4W4G|1|YA|C|231
4W4G|1|YA|G|232
4W4G|1|YA|A|233
4W4G|1|YA|C|234
4W4G|1|YA|U|235
*
4W4G|1|YA|A|262
4W4G|1|YA|C|263
4W4G|1|YA|C|264
4W4G|1|YA|A|265
4W4G|1|YA|G|266
*
4W4G|1|YA|C|426
4W4G|1|YA|U|427
4W4G|1|YA|A|428
4W4G|1|YA|A|429
4W4G|1|YA|G|430
4W4G|1|YA|U|431
4W4G|1|YA|A|432
4W4G|1|YA|C|433

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y7

50S ribosomal protein L34