J6_4WCE_001

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC

Length

37 nucleotides

Bulged bases

4WCE|1|X|C|184, 4WCE|1|X|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WCE|1|X|G|45
4WCE|1|X|C|46
*
4WCE|1|X|G|181
4WCE|1|X|C|182
4WCE|1|X|A|183
4WCE|1|X|C|184
4WCE|1|X|A|185
4WCE|1|X|C|186
*
4WCE|1|X|G|217
4WCE|1|X|G|218
4WCE|1|X|A|219
4WCE|1|X|A|220
4WCE|1|X|G|221
4WCE|1|X|A|222
4WCE|1|X|G|223
4WCE|1|X|A|224
4WCE|1|X|A|225
4WCE|1|X|A|226
4WCE|1|X|G|227
*
4WCE|1|X|C|234
4WCE|1|X|G|235
4WCE|1|X|A|236
4WCE|1|X|U|237
4WCE|1|X|U|238
*
4WCE|1|X|A|265
4WCE|1|X|A|266
4WCE|1|X|G|267
4WCE|1|X|A|268
4WCE|1|X|G|269
*
4WCE|1|X|C|472
4WCE|1|X|U|473
4WCE|1|X|A|474
4WCE|1|X|A|475
4WCE|1|X|A|476
4WCE|1|X|U|477
4WCE|1|X|A|478
4WCE|1|X|C|479

Current chains

Chain X

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34