J6_4WFA_001

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC

Length

37 nucleotides

Bulged bases

4WFA|1|X|C|184, 4WFA|1|X|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFA|1|X|G|45
4WFA|1|X|C|46
*
4WFA|1|X|G|181
4WFA|1|X|C|182
4WFA|1|X|A|183
4WFA|1|X|C|184
4WFA|1|X|A|185
4WFA|1|X|C|186
*
4WFA|1|X|G|217
4WFA|1|X|G|218
4WFA|1|X|A|219
4WFA|1|X|A|220
4WFA|1|X|G|221
4WFA|1|X|A|222
4WFA|1|X|G|223
4WFA|1|X|A|224
4WFA|1|X|A|225
4WFA|1|X|A|226
4WFA|1|X|G|227
*
4WFA|1|X|C|234
4WFA|1|X|G|235
4WFA|1|X|A|236
4WFA|1|X|U|237
4WFA|1|X|U|238
*
4WFA|1|X|A|265
4WFA|1|X|A|266
4WFA|1|X|G|267
4WFA|1|X|A|268
4WFA|1|X|G|269
*
4WFA|1|X|C|472
4WFA|1|X|U|473
4WFA|1|X|A|474
4WFA|1|X|A|475
4WFA|1|X|A|476
4WFA|1|X|U|477
4WFA|1|X|A|478
4WFA|1|X|C|479

Current chains

Chain X

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34