J6_4WFB_001

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC

Length

37 nucleotides

Bulged bases

4WFB|1|X|C|184, 4WFB|1|X|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|G|45
4WFB|1|X|C|46
*
4WFB|1|X|G|181
4WFB|1|X|C|182
4WFB|1|X|A|183
4WFB|1|X|C|184
4WFB|1|X|A|185
4WFB|1|X|C|186
*
4WFB|1|X|G|217
4WFB|1|X|G|218
4WFB|1|X|A|219
4WFB|1|X|A|220
4WFB|1|X|G|221
4WFB|1|X|A|222
4WFB|1|X|G|223
4WFB|1|X|A|224
4WFB|1|X|A|225
4WFB|1|X|A|226
4WFB|1|X|G|227
*
4WFB|1|X|C|234
4WFB|1|X|G|235
4WFB|1|X|A|236
4WFB|1|X|U|237
4WFB|1|X|U|238
*
4WFB|1|X|A|265
4WFB|1|X|A|266
4WFB|1|X|G|267
4WFB|1|X|A|268
4WFB|1|X|G|269
*
4WFB|1|X|C|472
4WFB|1|X|U|473
4WFB|1|X|A|474
4WFB|1|X|A|475
4WFB|1|X|A|476
4WFB|1|X|U|477
4WFB|1|X|A|478
4WFB|1|X|C|479

Current chains

Chain X

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34