J6_4WPO_001

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WPO|1|AA|A|212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|AA|G|44
4WPO|1|AA|C|45
*
4WPO|1|AA|G|168
4WPO|1|AA|G|169
4WPO|1|AA|A|170
4WPO|1|AA|A|171
4WPO|1|AA|C|172
*
4WPO|1|AA|G|203
4WPO|1|AA|G|204
4WPO|1|AA|A|205
4WPO|1|AA|G|206
4WPO|1|AA|A|207
4WPO|1|AA|G|208
4WPO|1|AA|G|209
4WPO|1|AA|A|210
4WPO|1|AA|A|211
4WPO|1|AA|A|212
4WPO|1|AA|G|213
*
4WPO|1|AA|C|220
4WPO|1|AA|G|221
4WPO|1|AA|A|222
4WPO|1|AA|C|223
4WPO|1|AA|U|224
*
4WPO|1|AA|A|251
4WPO|1|AA|C|252
4WPO|1|AA|C|253
4WPO|1|AA|A|254
4WPO|1|AA|G|255
*
4WPO|1|AA|C|453
4WPO|1|AA|U|454
4WPO|1|AA|A|455
4WPO|1|AA|A|456
4WPO|1|AA|G|457
4WPO|1|AA|U|458
4WPO|1|AA|A|459
4WPO|1|AA|C|460

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A7

50S ribosomal protein L34