J6_4WPO_003

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WPO|1|CA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|CA|G|44
4WPO|1|CA|C|45
*
4WPO|1|CA|G|179
4WPO|1|CA|G|180
4WPO|1|CA|A|181
4WPO|1|CA|A|182
4WPO|1|CA|C|183
*
4WPO|1|CA|G|214
4WPO|1|CA|G|215
4WPO|1|CA|A|216
4WPO|1|CA|G|217
4WPO|1|CA|A|218
4WPO|1|CA|G|219
4WPO|1|CA|G|220
4WPO|1|CA|A|221
4WPO|1|CA|A|222
4WPO|1|CA|A|223
4WPO|1|CA|G|224
*
4WPO|1|CA|C|231
4WPO|1|CA|G|232
4WPO|1|CA|A|233
4WPO|1|CA|C|234
4WPO|1|CA|U|235
*
4WPO|1|CA|A|262
4WPO|1|CA|C|263
4WPO|1|CA|C|264
4WPO|1|CA|A|265
4WPO|1|CA|G|266
*
4WPO|1|CA|C|426
4WPO|1|CA|U|427
4WPO|1|CA|A|428
4WPO|1|CA|A|429
4WPO|1|CA|G|430
4WPO|1|CA|U|431
4WPO|1|CA|A|432
4WPO|1|CA|C|433

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C7

50S ribosomal protein L34