J6_4WQ1_003

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WQ1|1|1H|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQ1|1|1H|G|45
4WQ1|1|1H|C|46
*
4WQ1|1|1H|G|179
4WQ1|1|1H|G|180
4WQ1|1|1H|A|181
4WQ1|1|1H|A|182
4WQ1|1|1H|C|183
*
4WQ1|1|1H|G|214
4WQ1|1|1H|G|215
4WQ1|1|1H|A|216
4WQ1|1|1H|G|217
4WQ1|1|1H|A|218
4WQ1|1|1H|G|219
4WQ1|1|1H|G|220
4WQ1|1|1H|A|221
4WQ1|1|1H|A|222
4WQ1|1|1H|A|223
4WQ1|1|1H|G|224
*
4WQ1|1|1H|C|231
4WQ1|1|1H|G|232
4WQ1|1|1H|A|233
4WQ1|1|1H|C|234
4WQ1|1|1H|U|235
*
4WQ1|1|1H|A|262
4WQ1|1|1H|C|263
4WQ1|1|1H|C|264
4WQ1|1|1H|A|265
4WQ1|1|1H|G|266
*
4WQ1|1|1H|C|426
4WQ1|1|1H|U|427
4WQ1|1|1H|A|428
4WQ1|1|1H|A|429
4WQ1|1|1H|G|430
4WQ1|1|1H|U|431
4WQ1|1|1H|A|432
4WQ1|1|1H|C|433

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain P8

50S ribosomal protein L34