J6_4WQR_001

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WQR|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|14|G|45
4WQR|1|14|C|46
*
4WQR|1|14|G|179
4WQR|1|14|G|180
4WQR|1|14|A|181
4WQR|1|14|A|182
4WQR|1|14|C|183
*
4WQR|1|14|G|214
4WQR|1|14|G|215
4WQR|1|14|A|216
4WQR|1|14|G|217
4WQR|1|14|A|218
4WQR|1|14|G|219
4WQR|1|14|G|220
4WQR|1|14|A|221
4WQR|1|14|A|222
4WQR|1|14|A|223
4WQR|1|14|G|224
*
4WQR|1|14|C|231
4WQR|1|14|G|232
4WQR|1|14|A|233
4WQR|1|14|C|234
4WQR|1|14|U|235
*
4WQR|1|14|A|262
4WQR|1|14|C|263
4WQR|1|14|C|264
4WQR|1|14|A|265
4WQR|1|14|G|266
*
4WQR|1|14|C|426
4WQR|1|14|U|427
4WQR|1|14|A|428
4WQR|1|14|A|429
4WQR|1|14|G|430
4WQR|1|14|U|431
4WQR|1|14|A|432
4WQR|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34