J6_4WQU_001

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WQU|1|AA|A|212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|AA|G|44
4WQU|1|AA|C|45
*
4WQU|1|AA|G|168
4WQU|1|AA|G|169
4WQU|1|AA|A|170
4WQU|1|AA|A|171
4WQU|1|AA|C|172
*
4WQU|1|AA|G|203
4WQU|1|AA|G|204
4WQU|1|AA|A|205
4WQU|1|AA|G|206
4WQU|1|AA|A|207
4WQU|1|AA|G|208
4WQU|1|AA|G|209
4WQU|1|AA|A|210
4WQU|1|AA|A|211
4WQU|1|AA|A|212
4WQU|1|AA|G|213
*
4WQU|1|AA|C|220
4WQU|1|AA|G|221
4WQU|1|AA|A|222
4WQU|1|AA|C|223
4WQU|1|AA|U|224
*
4WQU|1|AA|A|251
4WQU|1|AA|C|252
4WQU|1|AA|C|253
4WQU|1|AA|A|254
4WQU|1|AA|G|255
*
4WQU|1|AA|C|453
4WQU|1|AA|U|454
4WQU|1|AA|A|455
4WQU|1|AA|A|456
4WQU|1|AA|G|457
4WQU|1|AA|U|458
4WQU|1|AA|A|459
4WQU|1|AA|C|460

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A7

50S ribosomal protein L34